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Seed Starting Problems - Trouble Shooting

Whether indoors or out, when seeds do not sprout, it is a major disappointment, and a setback to your garden plans.

If you have bought fresh, current year seed, and it is a reputable brand, it almost never is the fault of the seed. Yet most often, the gardener blames the seed. The trouble with this conclusion, is that the true cause is not identified, and the problem is apt to recur. In this situation, the gardener goes out, and buys new seed (a different brand perhaps). Then, they don't sprout again.

The task at hand, is to trouble shoot the true cause of the problem.  First, assume the seeds were good, and then try to identify why the seeds did not sprout. This will almost always get you to problem resolution and corrective action, resulting in successful germination on the second try.

Garden Tip: If the seeds were planted longer than the number of days to germination, do not assume they will not sprout. Growing conditions are often less than ideal, requiring additional days to germination. Seek to improve the germination environment.

The guide below will help you to trouble shoot problems, and to correct them.


Causes of Poor Seed Germination:

Garden Tip: Sometimes more than one of the problems below are present.

Cause / Problem: Description/ Cure
Seed planted too deep This is perhaps the #1 cause of germination problems experienced by new growers. Gardeners plant them too deep. Tiny seeds can be washed out of, or too deeply into the soil.

The seeds end up too deep, and they are unable to reach the surface.

Check the seed packet for proper seed depth. Plant at the recommended depth, or less. It's okay to plant seeds shallower than recommended.

For tiny seeds, try placing them on top of the soil, and lightly water them in.

Soil too wet or too dry In wet soil, seeds rot before they even get the chance to sprout.

In dry soils, seeds do not sprout. They dry out or "cook".

If the soil started out moist, then was allowed to dry out too much, the tiny seedling shrivels and dies before, or just after, emerging from the soil.

For almost all seeds, the soil should be moist, not wet all the time.

The soil should also be well draining, to allow excess moisture to drain away.

Soil temperature too hot or too cold In hot soils, seeds can actually bake, killing them.

In cold soils, seeds will not sprout.

In general, seeds of cold weather plants germinate in soil temperatures of 60 to 70 degrees. Warm weather plants germinate in temperatures of about 75 to 85 degrees.

Find the ideal soil temperature for the seed(s) you are planting.

Use a soil thermometer to check the temperature of the soil at planting depth.

For indoor starts,  home room temperatures are usually below ideal starting temperatures for warm weather seeds, like tomatoes and peppers. Use a germination mat, if necessary.

Soil too heavy, or too hard If the garden soil is heavy clay, or hard, it is difficult for seedlings to work their way up through the soil. It may also be difficult for the seedling's tiny roots to grow through the soil.

Small rocks, stones and debris, can keep seedlings from emerging.

Prior to planting, remove, rocks, wood and other debris, that can impede a seedling from emerging.

Work plenty of compost, and peat moss into the soil to loosen it up.

Garden Tip for heavy soils: When planting seeds, don't cover them in heavy garden soil. Use seed starter soil to cover them.

Pests or insects eating seeds Seeds are part of the diet of squirrels, chipmunks, mice, many birds, and some insects.

If your seeds didn't sprout, dig a small area up, to see if the seeds are there.

How to protect your seeds.from pests.

Days to Germination Check the seed packet for the number of days to germination. If you saved seeds and do not have the information, check our site for information on the plant(s) you are growing.

Germination times assume optimum sprouting conditions. The actual number of days will be equal to, or greater than, the days to germination.

Under less than ideal conditions, seeds will take longer to sprout.  

Seeds old , not properly stored. Using fresh seed is always recommended.

Many people save seed from prior years. If properly stored, some prior year's seeds may reman viable for years.

Unfortunately, saved seeds are often stored in less than ideal conditions.

If old seed does not sprout, it is definitely time to buy fresh seeds.

Seeds not viable The only way to assure that seeds are viable, is to do a seed germination test.

Seed companies are constantly performing this test, to assure product quality. As a result, store-bought, current year seeds are almost always viable. 

You can perform a seed germination test of your own. It is best to do so weeks before you plant them.

If you didn't use all the seeds during planting, do a germination test.

If old seeds fail to sprout, it's time to buy fresh seeds..

How to perform a germination test.

Plants sprout, then wilted and die Sometimes, with indoor plant starts, the plant wilts and dies shortly after sprouting. This Is NOT due to the quality of the seed.

Once the seedling has sprouted, bad seeds are no longer an issue.

Rather, this is a sign of Damping Off Disease. It is deadly to young seedlings. But, it is easily avoided.

How to eliminate damping Off Disease.


Garden Tips to Improve Seed Germination Success:

For indoor starts, use a heated germination mat.

Soak seeds in water prior to planting.

For large seeds, nick them prior to planting


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